Site-bond percolation solution to preventing the propagation of Phytophthora zoospores on plantations.
Identifieur interne : 000057 ( Main/Exploration ); précédent : 000056; suivant : 000058Site-bond percolation solution to preventing the propagation of Phytophthora zoospores on plantations.
Auteurs : J E Ramírez [Espagne] ; C. Pajares [Espagne] ; M I Martínez [Mexique] ; R. Rodríguez Fernández [Espagne] ; E. Molina-Gayosso [Mexique] ; J. Lozada-Lechuga [Mexique] ; A. Fernández Téllez [Mexique]Source :
- Physical review. E [ 2470-0053 ] ; 2020.
Abstract
We propose a strategy based on the site-bond percolation to minimize the propagation of Phytophthora zoospores on plantations, consisting in introducing physical barriers between neighboring plants. Two clustering processes are distinguished: (i) one of cells with the presence of the pathogen, detected on soil analysis, and (ii) that of diseased plants, revealed from a visual inspection of the plantation. The former is well described by the standard site-bond percolation. In the latter, the percolation threshold is fitted by a Tsallis distribution when no barriers are introduced. We provide, for both cases, the formulas for the minimal barrier density to prevent the emergence of the spanning cluster. Though this work is focused on a specific pathogen, the model presented here can also be applied to prevent the spreading of other pathogens that disseminate, by other means, from one plant to the neighboring ones. Finally, the application of this strategy to three types of commercially important Mexican chili plants is also shown.
DOI: 10.1103/PhysRevE.101.032301
PubMed: 32289901
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Rodríguez Fernández</name><affiliation wicri:level="2"><nlm:affiliation>Instituto Galego de Física de Altas Enerxías, Universidad de Santiago de Compostela, E-15782 Santiago de Compostela, España.</nlm:affiliation><country xml:lang="fr">Espagne</country><wicri:regionArea>Instituto Galego de Física de Altas Enerxías, Universidad de Santiago de Compostela, E-15782 Santiago de Compostela</wicri:regionArea><placeName><region nuts="2" type="communauté">Galice</region></placeName></affiliation></author><author><name sortKey="Molina Gayosso, E" sort="Molina Gayosso, E" uniqKey="Molina Gayosso E" first="E" last="Molina-Gayosso">E. Molina-Gayosso</name><affiliation wicri:level="1"><nlm:affiliation>Universidad Politécnica de Puebla, Tercer carril del Ejido Serrano, 72640, Juan C. Bonilla, Puebla, México.</nlm:affiliation><country xml:lang="fr" wicri:curation="lc">Mexique</country><wicri:regionArea>Universidad Politécnica de Puebla, Tercer carril del Ejido Serrano, 72640, Juan C. Bonilla, Puebla</wicri:regionArea><wicri:noRegion>Puebla</wicri:noRegion></affiliation></author><author><name sortKey="Lozada Lechuga, J" sort="Lozada Lechuga, J" uniqKey="Lozada Lechuga J" first="J" last="Lozada-Lechuga">J. Lozada-Lechuga</name><affiliation wicri:level="1"><nlm:affiliation>Universidad Politécnica de Puebla, Tercer carril del Ejido Serrano, 72640, Juan C. Bonilla, Puebla, México.</nlm:affiliation><country xml:lang="fr" wicri:curation="lc">Mexique</country><wicri:regionArea>Universidad Politécnica de Puebla, Tercer carril del Ejido Serrano, 72640, Juan C. Bonilla, Puebla</wicri:regionArea><wicri:noRegion>Puebla</wicri:noRegion></affiliation></author><author><name sortKey="Fernandez Tellez, A" sort="Fernandez Tellez, A" uniqKey="Fernandez Tellez A" first="A" last="Fernández Téllez">A. Fernández Téllez</name><affiliation wicri:level="1"><nlm:affiliation>Facultad de Ciencias Físico Matemáticas, Benemérita Universidad Autónoma de Puebla, Apartado Postal 165, 72000 Puebla, Puebla, México.</nlm:affiliation><country xml:lang="fr" wicri:curation="lc">Mexique</country><wicri:regionArea>Facultad de Ciencias Físico Matemáticas, Benemérita Universidad Autónoma de Puebla, Apartado Postal 165, 72000 Puebla, Puebla</wicri:regionArea><wicri:noRegion>Puebla</wicri:noRegion></affiliation></author></analytic><series><title level="j">Physical review. E</title><idno type="eISSN">2470-0053</idno><imprint><date when="2020" type="published">2020</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">We propose a strategy based on the site-bond percolation to minimize the propagation of Phytophthora zoospores on plantations, consisting in introducing physical barriers between neighboring plants. Two clustering processes are distinguished: (i) one of cells with the presence of the pathogen, detected on soil analysis, and (ii) that of diseased plants, revealed from a visual inspection of the plantation. The former is well described by the standard site-bond percolation. In the latter, the percolation threshold is fitted by a Tsallis distribution when no barriers are introduced. We provide, for both cases, the formulas for the minimal barrier density to prevent the emergence of the spanning cluster. Though this work is focused on a specific pathogen, the model presented here can also be applied to prevent the spreading of other pathogens that disseminate, by other means, from one plant to the neighboring ones. Finally, the application of this strategy to three types of commercially important Mexican chili plants is also shown.</div></front></TEI><pubmed><MedlineCitation Status="PubMed-not-MEDLINE" Owner="NLM"><PMID Version="1">32289901</PMID><DateRevised><Year>2020</Year><Month>04</Month><Day>15</Day></DateRevised><Article PubModel="Print"><Journal><ISSN IssnType="Electronic">2470-0053</ISSN><JournalIssue CitedMedium="Internet"><Volume>101</Volume><Issue>3-1</Issue><PubDate><Year>2020</Year><Month>Mar</Month></PubDate></JournalIssue><Title>Physical review. E</Title><ISOAbbreviation>Phys Rev E</ISOAbbreviation></Journal><ArticleTitle>Site-bond percolation solution to preventing the propagation of Phytophthora zoospores on plantations.</ArticleTitle><Pagination><MedlinePgn>032301</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1103/PhysRevE.101.032301</ELocationID><Abstract><AbstractText>We propose a strategy based on the site-bond percolation to minimize the propagation of Phytophthora zoospores on plantations, consisting in introducing physical barriers between neighboring plants. Two clustering processes are distinguished: (i) one of cells with the presence of the pathogen, detected on soil analysis, and (ii) that of diseased plants, revealed from a visual inspection of the plantation. The former is well described by the standard site-bond percolation. In the latter, the percolation threshold is fitted by a Tsallis distribution when no barriers are introduced. We provide, for both cases, the formulas for the minimal barrier density to prevent the emergence of the spanning cluster. Though this work is focused on a specific pathogen, the model presented here can also be applied to prevent the spreading of other pathogens that disseminate, by other means, from one plant to the neighboring ones. Finally, the application of this strategy to three types of commercially important Mexican chili plants is also shown.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Ramírez</LastName><ForeName>J E</ForeName><Initials>JE</Initials><AffiliationInfo><Affiliation>Departamento de Física de Partículas, Universidad de Santiago de Compostela, E-15782 Santiago de Compostela, España.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Instituto Galego de Física de Altas Enerxías, Universidad de Santiago de Compostela, E-15782 Santiago de Compostela, España.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Pajares</LastName><ForeName>C</ForeName><Initials>C</Initials><AffiliationInfo><Affiliation>Departamento de Física de Partículas, Universidad de Santiago de Compostela, E-15782 Santiago de Compostela, España.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Instituto Galego de Física de Altas Enerxías, Universidad de Santiago de Compostela, E-15782 Santiago de Compostela, España.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Martínez</LastName><ForeName>M I</ForeName><Initials>MI</Initials><AffiliationInfo><Affiliation>Facultad de Ciencias Físico Matemáticas, Benemérita Universidad Autónoma de Puebla, Apartado Postal 165, 72000 Puebla, Puebla, México.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Rodríguez Fernández</LastName><ForeName>R</ForeName><Initials>R</Initials><AffiliationInfo><Affiliation>Instituto Galego de Física de Altas Enerxías, Universidad de Santiago de Compostela, E-15782 Santiago de Compostela, España.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Molina-Gayosso</LastName><ForeName>E</ForeName><Initials>E</Initials><AffiliationInfo><Affiliation>Universidad Politécnica de Puebla, Tercer carril del Ejido Serrano, 72640, Juan C. Bonilla, Puebla, México.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Lozada-Lechuga</LastName><ForeName>J</ForeName><Initials>J</Initials><AffiliationInfo><Affiliation>Universidad Politécnica de Puebla, Tercer carril del Ejido Serrano, 72640, Juan C. Bonilla, Puebla, México.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Fernández Téllez</LastName><ForeName>A</ForeName><Initials>A</Initials><AffiliationInfo><Affiliation>Facultad de Ciencias Físico Matemáticas, Benemérita Universidad Autónoma de Puebla, Apartado Postal 165, 72000 Puebla, Puebla, México.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList></Article><MedlineJournalInfo><Country>United States</Country><MedlineTA>Phys Rev E</MedlineTA><NlmUniqueID>101676019</NlmUniqueID><ISSNLinking>2470-0045</ISSNLinking></MedlineJournalInfo><CitationSubset>IM</CitationSubset></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2019</Year><Month>09</Month><Day>10</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2020</Year><Month>01</Month><Day>30</Day></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2020</Year><Month>4</Month><Day>16</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2020</Year><Month>4</Month><Day>16</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2020</Year><Month>4</Month><Day>16</Day><Hour>6</Hour><Minute>1</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">32289901</ArticleId><ArticleId IdType="doi">10.1103/PhysRevE.101.032301</ArticleId></ArticleIdList></PubmedData></pubmed><affiliations><list><country><li>Espagne</li><li>Mexique</li></country><region><li>Galice</li></region></list><tree><country name="Espagne"><region name="Galice"><name sortKey="Ramirez, J E" sort="Ramirez, J E" uniqKey="Ramirez J" first="J E" last="Ramírez">J E Ramírez</name></region><name sortKey="Pajares, C" sort="Pajares, C" uniqKey="Pajares C" first="C" last="Pajares">C. Pajares</name><name sortKey="Pajares, C" sort="Pajares, C" uniqKey="Pajares C" first="C" last="Pajares">C. Pajares</name><name sortKey="Ramirez, J E" sort="Ramirez, J E" uniqKey="Ramirez J" first="J E" last="Ramírez">J E Ramírez</name><name sortKey="Rodriguez Fernandez, R" sort="Rodriguez Fernandez, R" uniqKey="Rodriguez Fernandez R" first="R" last="Rodríguez Fernández">R. Rodríguez Fernández</name></country><country name="Mexique"><noRegion><name sortKey="Martinez, M I" sort="Martinez, M I" uniqKey="Martinez M" first="M I" last="Martínez">M I Martínez</name></noRegion><name sortKey="Fernandez Tellez, A" sort="Fernandez Tellez, A" uniqKey="Fernandez Tellez A" first="A" last="Fernández Téllez">A. Fernández Téllez</name><name sortKey="Lozada Lechuga, J" sort="Lozada Lechuga, J" uniqKey="Lozada Lechuga J" first="J" last="Lozada-Lechuga">J. Lozada-Lechuga</name><name sortKey="Molina Gayosso, E" sort="Molina Gayosso, E" uniqKey="Molina Gayosso E" first="E" last="Molina-Gayosso">E. 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